Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs11916858 chr3:147140680 T/G 4.29E-5 118 46.43 37.13 25.83 KM Plot
THYM rs11937931 chr4:9613699 A/C 9.25E-9 117 40.67 42.9 12.63 KM Plot
THYM rs11945043 chr4:9646794 C/T 9.25E-9 117 40.67 42.9 12.63 KM Plot
THYM rs11980492 chr7:76134236 C/T 2.94E-5 117 39.5 46.23 28.43 KM Plot
THYM rs11981159 chr7:29708802 G/A 5.82E-13 117 38.23 48.18 6 KM Plot
THYM rs12028248 chr1:46690331 C/G 0.000227 119 46.27 41.22 29.23 KM Plot
THYM rs12053509 chr2:106895527 C/T 2.4E-6 115 42.25 46.27 15.98 KM Plot
THYM rs12056361 chr8:50146327 C/T 2.69E-10 118 46.27 50.82 25.83 KM Plot
THYM rs12101809 chr15:78779801 C/T 3.52E-5 118 42.82 46.6 26 KM Plot
THYM rs12118436 chr1:26900920 A/T 9.36E-5 115 46.6 29.23 25.92 KM Plot
THYM rs12126000 chr1:101787854 C/T 7.5E-13 118 46.27 26.88 6 KM Plot
THYM rs12136214 chr1:85745566 C/T 8.6E-5 115 40.67 46.27 53.63 KM Plot
THYM rs12138565 chr1:210547486 A/G 0.000272 118 46.6 32.33 NA KM Plot
THYM rs12141729 chr1:210536554 C/T 0.00015 116 46.6 32.7 NA KM Plot
THYM rs12145699 chr1:210561861 A/G 6.07E-5 119 80.38 32.7 48 KM Plot